I have a number of entries that are paid expenses. They show up as unpaid on the A/P screen. When you open up the record, they are indeed "paid". I don't know what I must have done when I made these records, but I can't get them to reconcile (not using that in the check register parlance).
The first thing I would try is to do Utilities/Database Maintenance including Update GL totals. That solves mysterious inconsistent things for me a lot of times.
Jeff WyattAbilene, Texas